QMENTA Tools Catalog

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QMENTA Tools Catalog

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FreeSurfer 6.0 + Hippocampal Subfields Image
FreeSurfer 6.0 + Hippocampal Subfields
Purpose: Computes a morphology study of a T1 image using the recon-all script from FreeSurfer.
Regulatory Clearance: Research use only
IB DCE Image
IB DCE
Purpose: FDA cleared dynamic contrast-enhanced MRI (DCE-MRI) analysis with multiple models. 
Regulatory Clearance: FDA Cleared
IB DeltaT1 Mapping Image
IB DeltaT1 Mapping
Purpose: FDA cleared delta T1 measurement for tumor analysis.
Regulatory Clearance: FDA Cleared
IB Diffusion Image
IB Diffusion
Purpose: FDA Cleared DW-MRI parametric analysis with multiple diffusion models
Regulatory Clearance: FDA Cleared
IB Neuro (DSC) Image
IB Neuro (DSC)
Purpose: FDA cleared dynamic susceptibility contrast-enhanced MRI (DSC-MRI) analysis.
Regulatory Clearance: FDA Cleared
Lesion Segmentation Workflow (LSW) Image
Lesion Segmentation Workflow (LSW)
Purpose: Lesion segmentation using the LST with manual correction workflow.
Regulatory Clearance: Research use only
Lesion TOADS Workflow (LTW) Image
Lesion TOADS Workflow (LTW)
Purpose: Popular lesion TOADS algorithm that preserves brain topology to improve volumetry and shape analysis.
Regulatory Clearance: Research use only
mdbrain - Brain Volumetry Image
mdbrain - Brain Volumetry
Purpose: Robust volumetry solution for brain MRIs with T1-MPRage as input data
Regulatory Clearance: CE Marking
mdbrain - Lesion Characterization Image
mdbrain - Lesion Characterization
Purpose: Lesion segmentation of brain MRIs
Regulatory Clearance: CE Marking
Q-Brain Tumor Segmentation Workflow (Q-BTS) Image
Q-Brain Tumor Segmentation Workflow (Q-BTS)
Purpose: Multi-regional segmentation of gliomas and glioblastomas
Regulatory Clearance: Research use only
Q-dMRI Lesion-Load Structural Connectome (Q-LLSC) Image
Q-dMRI Lesion-Load Structural Connectome (Q-LLSC)
Purpose: QMENTA’s fully automated connectome pipeline enhanced with lesion-load capabilities.
Regulatory Clearance: Research use only
Q-dMRI Structural Connectome (Q-SC) Image
Q-dMRI Structural Connectome (Q-SC)
Purpose: QMENTA’s fully automated connectome pipeline.
Regulatory Clearance: Research use only
Q-FiberMapper (Q-FM) Image
Q-FiberMapper (Q-FM)
Purpose: Fascicle based white matter segmentation and DWI quantification
Regulatory Clearance: Pending
Q-FiberMapper + Lesion Load Measures (Q-FM+LLM) Image
Q-FiberMapper + Lesion Load Measures (Q-FM+LLM)
Purpose: Fascicle based WM segmentation with lesion load measures per fascicle
Regulatory Clearance: Research use only
SIENAX 2.6 Image
SIENAX 2.6
Purpose: Quantification of brain tissue volumes in a single timepoint.
Regulatory Clearance: Research use only
Volumetric Report (VR) Image
Volumetric Report (VR)
Purpose: FreeSurfer-based whole brain volumetry with large normative database.
Regulatory Clearance: Research use only
FreeSurfer 5.3 Image
FreeSurfer 5.3
Purpose: Computes a morphology study of a T1 image using the recon-all script from FreeSurfer.
Regulatory Clearance: Research use only
fMRI Structural Connectome Image
fMRI Structural Connectome
Purpose: This tool can give insights on how different regions of the brain are functionally correlated
Regulatory Clearance: Research use only
SIENA 2.6 Image
SIENA 2.6
Purpose: Quantification of a two-time-point longitudinal analysis of brain change, in particular, the estimation of atrophy
Regulatory Clearance: Research use only
Mindboggle Workflow Image
Mindboggle Workflow
Purpose: takes in preprocessed T1-weighted MRI data, and outputs volume, surface, and tabular data containing the label, feature, and shapes information for further analysis.
Regulatory Clearance: Research use only
ANTs Volumetry Workflow Image
ANTs Volumetry Workflow
Purpose: Open source whole-brain morphology workflow using ANTs package tools.
Regulatory Clearance: Research use only
FIRST Workflow Image
FIRST Workflow
Purpose: Model-based sub-cortical structure segmentation/volumetry tool
Regulatory Clearance: Research use only
LST-LPA 2.0 Workflow Image
LST-LPA 2.0 Workflow
Purpose: Automated segmentation of T2 hyperintense lesions in FLAIR images.
Regulatory Clearance: Research use only
dMRI FA/Scalar Maps Image
dMRI FA/Scalar Maps
Purpose: Produces tensor-derived maps such as fractional anisotropy and mean diffusivity from diffusion MRI images, as well as maps from additional scalar measures.
Regulatory Clearance: Research use only
FreeSurfer 6.0 + Hippocampal Subfields Image
FreeSurfer 6.0 + Hippocampal Subfields
Computes a morphology study of a T1 image using the recon-all script from FreeSurfer. Produces a quantitative report of volume and thickness from all regions of the sub-cortex and the Desikan... Read More
Purpose: Computes a morphology study of a T1 image using the recon-all script from FreeSurfer.
Regulatory Clearance: Research use only
Provider: QMENTA
IB DCE Image
IB DCE
FDA cleared dynamic contrast-enhanced MRI (DCE-MRI) analysis with multiple models. Key features: Automated AIF/VIF selection Multiple models T... Read More
Purpose: FDA cleared dynamic contrast-enhanced MRI (DCE-MRI) analysis with multiple models. 
Regulatory Clearance: FDA Cleared
Provider: IB
IB DeltaT1 Mapping Image
IB DeltaT1 Mapping
FDA cleared delta T1 measurement for tumor analysis. Key features: Delta T1 parametric map calculation DICOM export
Purpose: FDA cleared delta T1 measurement for tumor analysis.
Regulatory Clearance: FDA Cleared
Provider: IB
IB Diffusion Image
IB Diffusion
FDA cleared DW-MRI parametric analysis with multiple diffusion models including apparent diffusion coefficient (ADC) for 2 or more B-values and intravoxel incoherent motion (IVIM) and distributed d... Read More
Purpose: FDA Cleared DW-MRI parametric analysis with multiple diffusion models
Regulatory Clearance: FDA Cleared
Provider: IB
IB Neuro (DSC) Image
IB Neuro (DSC)
FDA cleared dynamic susceptibility contrast-enhanced MRI (DSC-MRI) analysis. Key features: Automated AIF/VIF selection Output parametric maps: ... Read More
Purpose: FDA cleared dynamic susceptibility contrast-enhanced MRI (DSC-MRI) analysis.
Regulatory Clearance: FDA Cleared
Provider: IB
Lesion Segmentation Workflow (LSW) Image
Lesion Segmentation Workflow (LSW)
Segmentation of hyperintense lesions in white matter from T2-FLAIR imaging using a deep convolutional neural network. The White Matter Hyperintensity Lesion Segmentation workflow automatical... Read More
Purpose: Lesion segmentation using the LST with manual correction workflow.
Regulatory Clearance: Research use only
Provider: QMENTA
Lesion TOADS Workflow (LTW) Image
Lesion TOADS Workflow (LTW)
Popular lesion TOADS algorithm for simultaneous brain structures and multiple sclerosis (MS) lesion segmentation of MS Brains. The brain segmentation is topologically consistent, makes use of both?... Read More
Purpose: Popular lesion TOADS algorithm that preserves brain topology to improve volumetry and shape analysis.
Regulatory Clearance: Research use only
Provider: QMENTA
mdbrain - Brain Volumetry Image
mdbrain - Brain Volumetry
Robust volumetry solution for brain MRIs with T1-MPRage as input data. A large normative database allows individual reference values based on percentiles taking gender, age and intracranial volume ... Read More
Purpose: Robust volumetry solution for brain MRIs with T1-MPRage as input data
Regulatory Clearance: CE Marking
Provider: Mediaire
mdbrain - Lesion Characterization Image
mdbrain - Lesion Characterization
Robust solution for lesion segmentation of brain MRIs with T1- and T2-FLAIR as input data. By regional classification specific and unspecific lesions for Multiple Sclerosis can be differentiated. P... Read More
Purpose: Lesion segmentation of brain MRIs
Regulatory Clearance: CE Marking
Provider: Mediaire
Q-Brain Tumor Segmentation Workflow (Q-BTS) Image
Q-Brain Tumor Segmentation Workflow (Q-BTS)
Multi-regional segmentation of gliomas and glioblastomas from contrast-enhanced imaging using deep neural networks. The BTS segments a tumor into necrotic regions, enhancing regions and regions of ... Read More
Purpose: Multi-regional segmentation of gliomas and glioblastomas
Regulatory Clearance: Research use only
Provider: QMENTA
Q-dMRI Lesion-Load Structural Connectome (Q-LLSC) Image
Q-dMRI Lesion-Load Structural Connectome (Q-LLSC)
QMENTA’s fully automated connectome pipeline enhanced with lesion-load capabilities. Specially designed for neurodegenerative diseases. Yields a full dis-connectomic analysis from DTI or HARDI im... Read More
Purpose: QMENTA’s fully automated connectome pipeline enhanced with lesion-load capabilities.
Regulatory Clearance: Research use only
Provider: QMENTA
Q-dMRI Structural Connectome (Q-SC) Image
Q-dMRI Structural Connectome (Q-SC)
QMENTA’s fully automated connectome pipeline. Yields a full connectomic analysis from DTI or HARDI images and T1 weighted anatomical imaging. The connectome pipeline can use standard diffusion te... Read More
Purpose: QMENTA’s fully automated connectome pipeline.
Regulatory Clearance: Research use only
Provider: QMENTA
Q-FiberMapper (Q-FM) Image
Q-FiberMapper (Q-FM)
The Q-FiberMapper derives diffusion parameters for specific white matter fascicles in the brain using a combination diffusion-weighted magnetic resonance imaging (dMRI) and anatomical MRI informati... Read More
Purpose: Fascicle based white matter segmentation and DWI quantification
Regulatory Clearance: Pending
Provider: QMENTA
Q-FiberMapper + Lesion Load Measures (Q-FM+LLM) Image
Q-FiberMapper + Lesion Load Measures (Q-FM+LLM)
This tool combines the white-matter fascicle segmentation of the Q-FiberMapper with lesion-load quantification.  Specially designed for neurodegenerative diseases. Key features... Read More
Purpose: Fascicle based WM segmentation with lesion load measures per fascicle
Regulatory Clearance: Research use only
Provider: QMENTA
SIENAX 2.6 Image
SIENAX 2.6
SIENAX quantifies brain tissue volumes in a single timepoint. SIENAX performs brain extraction, tissue segmentation, and obtains tissue volumes normalized for skull size. Key featur... Read More
Purpose: Quantification of brain tissue volumes in a single timepoint.
Regulatory Clearance: Research use only
Provider: QMENTA
Volumetric Report (VR) Image
Volumetric Report (VR)
FreeSurfer-based whole brain volumetry with large normative database. All regions of the sub-cortex and the Desikan-Killiany-Tournville cortical atlas with volume and thickness are quantified in th... Read More
Purpose: FreeSurfer-based whole brain volumetry with large normative database.
Regulatory Clearance: Research use only
Provider: QMENTA
FreeSurfer 5.3 Image
FreeSurfer 5.3
Computes a morphology study of a T1 image using the recon-all script from FreeSurfer. Produces a quantitative report of volume and thickness from all regions of the sub-cortex and the Desikan... Read More
Purpose: Computes a morphology study of a T1 image using the recon-all script from FreeSurfer.
Regulatory Clearance: Research use only
Provider: QMENTA
fMRI Structural Connectome Image
fMRI Structural Connectome
This tool, based on resting-state functional connectivity, can give insights on how different regions of the brain are functionally correlated. It can be useful to measure how certain diseases migh... Read More
Purpose: This tool can give insights on how different regions of the brain are functionally correlated
Regulatory Clearance: Research use only
Provider: QMENTA
SIENA 2.6 Image
SIENA 2.6
SIENA quantifies a two-time-point longitudinal analysis of brain change, in particular, the estimation of atrophy (volumetric loss of brain tissue). SIENA has been used in many clin... Read More
Purpose: Quantification of a two-time-point longitudinal analysis of brain change, in particular, the estimation of atrophy
Regulatory Clearance: Research use only
Provider: QMENTA
Mindboggle Workflow Image
Mindboggle Workflow
Mindboggle’s open-source brain morphometry tool which takes in preprocessed T1-weighted MRI data, and outputs volume, surface, and tabular data containing the label, feature, and ... Read More
Purpose: takes in preprocessed T1-weighted MRI data, and outputs volume, surface, and tabular data containing the label, feature, and shapes information for further analysis.
Regulatory Clearance: Research use only
Provider: QMENTA
ANTs Volumetry Workflow Image
ANTs Volumetry Workflow
Open source whole-brain morphology workflow using ANTs package tools. Includes tissue segmentation, cortical parcellation using DKT-40 or AAL atlas and optional averaged region-based cortical thick... Read More
Purpose: Open source whole-brain morphology workflow using ANTs package tools.
Regulatory Clearance: Research use only
Provider: QMENTA
FIRST Workflow Image
FIRST Workflow
FIRST is a model-based sub-cortical structure segmentation/volumetry tool. The shape/appearance models used in FIRST are constructed from manually segmented images provided by the Center for ... Read More
Purpose: Model-based sub-cortical structure segmentation/volumetry tool
Regulatory Clearance: Research use only
Provider: QMENTA
LST-LPA 2.0 Workflow Image
LST-LPA 2.0 Workflow
Automated segmentation of T2 hyperintense lesions in FLAIR images. Originally developed for the segmentation of MS lesions, it has also been proven to be useful for the segmentation of brain lesion... Read More
Purpose: Automated segmentation of T2 hyperintense lesions in FLAIR images.
Regulatory Clearance: Research use only
Provider: QMENTA
dMRI FA/Scalar Maps Image
dMRI FA/Scalar Maps
Produces tensor-derived maps such as fractional anisotropy and mean diffusivity from diffusion MRI images, as well as maps from additional scalar measures. It also produces tensor and eigenv... Read More
Purpose: Produces tensor-derived maps such as fractional anisotropy and mean diffusivity from diffusion MRI images, as well as maps from additional scalar measures.
Regulatory Clearance: Research use only
Provider: QMENTA