QMENTA Tools Catalog

Mindboggle Workflow

Mindboggle’s open-source brain morphometry tool which takes in preprocessed T1-weighted MRI data, and outputs volume, surface, and tabular data containing the label, feature, and shapes information for further analysis.
Mindboggle uses a hybrid approach combining gray/white matter segmentation from FreeSurfer and ANTs packages to produce volumetric quantifications of improved accuracy and reduced variability.

Key features:

  • All outputs from FreeSurfer and ANTs volumetric workflows.
  • Parallel computation of ANTs and FreeSurfer.
  • Mindboggle atlas-based parcellation and quantitative volumetry of improved accuracy.
Category:
Head & spine
Tags:
Alzheimer's disease, Fronto-temporal dementia, Multiple sclerosis, Neurodevelopment, Neuroplasticity, Neuropsychiatric disorders, Other dementias, Parkinson's disease, Progressive supranuclear palsy
Purpose:
takes in preprocessed T1-weighted MRI data, and outputs volume, surface, and tabular data containing the label, feature, and shapes information for further analysis.
Regulatory Clearance:
Research use only
Provider:
QMENTA
Modalities:
T1